CLUSTAL W multiple sequence alignment T._aestivum ATGGTGCTGGATCTCAATGTGGAGTCGCCGGCGGACTCGGGCACGTCCAGCTCCTCCGTG T._aestivum_3 ATGGTGCTGGATCTCAATGTGGAGTCGCCGGCGGACTCGGGCACGTCCAGCTCCTCCGTG T._turgidum_dicocco ATGGTGCTGGATCTCAATGTGGAGTCGCCGGCGGACTCGGGCACGTCCAGCTCCTCCGTG T._urartu ATGGTGCTGGATCTCAATGTGGAGTCGCCGGCGGACTCGGGCACGTCCAGCTCCTCCGTG Aegilops_tauschii ATGGTGCTGGATCTCAATGTGGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTG T._aestivum_D ATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTG Triticum_turgidum ATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTG T._aestivum_B ATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTG Aegilops_speltoides ATGGTGCTGGATCTCAATGTCGAGTCGCCGGCGGACTCCGGCACGTCCAGCTCGTCCGTG Hordeum_vulgare ATGGTGCTGGATCTCAATGTCGAGTCTCCGGCCGACTCCGGCACGTCCAGCTCGTCCGTG ******************** ***** ***** ***** ************** ****** T._aestivum CTCAACTCCGCGGACGC------CGGTGGCGGCGGCTTCCGGTTCGGCCTGCTCGGGAGC T._aestivum_3 CTCAACTCCGCGGACGC------CGGTGGCGGCGGCTTCCGGTTCGGCCTGCTCGGGAGC T._turgidum_dicocco CTCAACTCCGCGGACGC------CGGTGGCGGCGGCTTCCGGTTCGGCCTGCTCGGGAGC T._urartu CTCAACTCCGCGGACGC------CGGTGGCGGCGGCTTCCGGTTCGGCCTGCTCGGAAGC Aegilops_tauschii CTCAACTCCGCGGACGC---CGGCGGCGGCGGCGGCTTCCGGTTCGGCCTGCTCGGGAGC T._aestivum_D CTCAACTCCGCGGACGC---CGGCGGCGGCGGCGGCTTCAGGTTCGGCCTGCTCGGGAGC Triticum_turgidum CTTAACTCCGCGGACGC------------CGGCGGCTTCCGGTTCGGCCTGCTCGGGAGC T._aestivum_B CTCAACTCCGCGGACGC------------CGGCGGCTTCCGGTTCGGCCTGCTCGGGAGC Aegilops_speltoides CTCAACTCCGCGGACGCCGCCGGCGGCGGCGGCGGCTTCCGGTTCGGCCTGCTCGGGAGC Hordeum_vulgare CTCAACTCCGCGGACGC---------CGCCGGCGCCTTCCGGTTCGGCCTGCTCGGGAGC ** ************** ***** **** **************** *** T._aestivum CCTGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGG---GCCCGGGTTCGTCACG T._aestivum_3 CCTGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGG---GCCCGGGTTCGTCACG T._turgidum_dicocco CCTGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGG---GCCCGGGTTCGTCACG T._urartu CCTGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGG---GCCCGGGTTCGTCACG Aegilops_tauschii CCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGG---GTCCGGGTTCGTGACG T._aestivum_D CCCGATGATGACGACTGCTCCGGCGAGCCGGCGCCGGTCGG---GTCCGGGTTCGTGACG Triticum_turgidum CCCGATGACGACGACTGGTCCGGCGAGCCGGCGCCGGCCGC---GTCCGGGTTCGTGACG T._aestivum_B CCCGATGACGACGACTGGTCCGGCGAGCCGGCGCCGGCCGC---GTCCGGGTTCGTGACG Aegilops_speltoides CCTGATGACGACGACTGCTCCGGCGAGCCGGCGCCGGCCGC---GTCCGGGTTCGTGACG Hordeum_vulgare CTCGATGACGACGACTGCTCCGGCGAGCTGGCGCCGGCCGCCGCGTCCGGGTTCGTGACG * ***** ******** ********** ******** ** * ********** *** T._aestivum AGGCAGCTCTTCCCCGCGTCGCCGCCCGGGCACGCGGGCGCGCCCGGGGTGACGATGGGG T._aestivum_3 AGGCAGCTCTTCCCCGCGTCGCCGCCCGGGCACGCGGGCGCGCCCGGGGTGACGATGGGG T._turgidum_dicocco AGGCAGCTCTTCCCCGCGTCGCCGCCCGGGCACGCGGGCGCGCCCGGGGTGACGATGGGG T._urartu AGGCAGCTCTTCCCCGCGTCGCCGCCCGGGCACGCGGGCGCGCCTGGGGTGACGATGGGG Aegilops_tauschii AGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGG T._aestivum_D AGGCAGCTCTTCCCCGCGTCGCCGCCCGGTCACGCGGGCGCGCCCGGGATGATGACGGGG Triticum_turgidum AGGCAGCTTTTCCCCGCGTCGCCGCCCG------------CGCCCGGGATGATGATGGGG T._aestivum_B AGGCAGCTCTTCCCCGCGTCGCCGCCCG------------CGCCCGGGATGATGATGGGG Aegilops_speltoides AGGCAGCTCTTCCCCGCGTCGCCGCCCG------------CGCCCGGGATGATGATGGCG Hordeum_vulgare AGGCAGCTGTTCCCCGCGCCGCCGCCCG------------CGCCCGGGGTCATGATGG-- ******** ********* ********* **** *** * * ** ** T._aestivum CAGCAGGCCCCGGCGCCTGCGCCGATGGCGCCCGTGTGGCAGCCGCGGCGCGCCGAGGAG T._aestivum_3 CAGCAGGCCCCGGCGCCTGCGCCGATGGCGCCCGTGTGGCAGCCGCGGCGCGCCGAGGAG T._turgidum_dicocco CAGCAGGCCCCGGCGCCTGCGCCGATGGCGCCCGTGTGGCAGCCGCGGCGCGCCGAGGAG T._urartu CAGCAGGCCCCGGCGCCTGCGCCGATGGCGCCCGTGTGGCAGCCGCGGCGCGCCGAGGAG Aegilops_tauschii CAGCTGGCACCGGCGCC---GCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAG T._aestivum_D CAGCTGGCACCGGCGCC---GCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAG Triticum_turgidum CAGCAGGCCCCGGCGCC---GCCGATGGCCCCCGTGTGGCAGCCGCGCCGCGCCGAGGAG T._aestivum_B CAGCAGGCCCCGGCGCC---GCCGATGGCCCCCGTGTGGCAGCCGCGCCGCGCCGAGGAG Aegilops_speltoides CAGCAGGCCCCGGCGCC---GCCGATGGCCCCCGTGTGGCAGCCGCGGCGCGCCGAGGAG Hordeum_vulgare -GGCAGGCGCCGGCGCCTCCGCCCACGGCGCCGGTGTGGCAACCTCGGCGCGCCGAGGAG ** *** ******** *** * *** ** ******** ** ** ************ T._aestivum CTCCTCGTGGCGCAGCGGATGGCGCCCGCGAAGAAGACGCGGCGGGGCCCGAGGTCGCGC T._aestivum_3 CTCCTCGTGGCGCAGCGGATGGCGCCCGCGAAGAAGACGCGGCGGGGCCCGAGGTCGCGC T._turgidum_dicocco CTCCTCGTGGCGCAGCGGATGGCGCCCGCGAAGAAGACGCGGCGGGGCCCGAGGTCGCGC T._urartu CTCGTCGTGGCGCAGCGGATGGCGCCCGCGAAGAAGACGCGGCGGGGCCCGAGGTCGCGC Aegilops_tauschii CTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTCGCGG T._aestivum_D CTCGTGATGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCGAGGTCGCGG Triticum_turgidum CTGGTCGCGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGG T._aestivum_B CTGGTCGCGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGCGGGCCGAGGTCGCGG Aegilops_speltoides CTGGTCGCGGCGCAGCGGGTGGCGCCCGCGAAGAAGACGCGGCGGGGGCCCAGGTCGCGG Hordeum_vulgare CTGGTCGTGGCGCAGCGGGTGGCCCCCAAGAAGAAGACGCGGCGGGGGCCGAGGTCGCGC ** * ********** **** *** *************** ** ** ******** T._aestivum AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC T._aestivum_3 AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC T._turgidum_dicocco AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC T._urartu AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC Aegilops_tauschii AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC T._aestivum_D AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC Triticum_turgidum AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC T._aestivum_B AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC Aegilops_speltoides AGCTCGCAGTACAGGGGCGTCACCTTCTACCGCAGGACCGGCCGGTGGGAGTCGCACATC Hordeum_vulgare AGCTCGCAGTACCGGGGCGTCACCTTCTACCGCAGGACCGGCCGCTGGGAGTCGCACATC ************ ******************************* *************** T._aestivum TGGGATTGCGGGAAGCAGGTCTACTTGGGTGGTTTCGACACTGCGCACGCGGCCGCAAGG T._aestivum_3 TGGGATTGCGGGAAGCAGGTCTACTTGGGTGGTTTCGACACTGCGCACGCGGCCGCAAGG T._turgidum_dicocco TGGGATTGCGGGAAGCAGGTCTACTTGGGTGGTTTCGACACTGCGCACGCGGCCGCAAGG T._urartu TGGGATTGCGGGAAGCAGGTCTACTTGGGTGGTTTCGACACTGCGCACGCGGCCGCAAGG Aegilops_tauschii TGGGACTGCGGGAAGCAGGTCTACTTAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGG T._aestivum_D TGGGACTGCGGGAAGCAGGTCTACTTAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGG Triticum_turgidum TGGGACTGCGGGAAGCAGGTCTAATTAGGTGGGTTCGACACTGCGCACGCGGCCGCAAGG T._aestivum_B TGGGACTGCGGGAAGCAGGTCTAATTAGGTGGGTTCGACACTGCGCACGCGGCCGCAAGG Aegilops_speltoides TGGGACTGCGGGAAGCAGGTCTACTTAGGTGGTTTCGACACTGCGCACGCGGCCGCAAGG Hordeum_vulgare TGGGATTGCGGGAAGCAGGTCTACTTGGGTGGTTTCGACACCGCGCACGCGGCCGCAAGG ***** ***************** ** ***** ******** ****************** T._aestivum GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG T._aestivum_3 GCCTACGATCGCGCGGCGATCAAGTTCTGGGGGCTGGAGGCCGACATCAACTTCAATCTG T._turgidum_dicocco GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG T._urartu GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG Aegilops_tauschii GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG T._aestivum_D GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG Triticum_turgidum GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG T._aestivum_B GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG Aegilops_speltoides GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG Hordeum_vulgare GCCTACGATCGCGCGGCGATCAAGTTCCGGGGGCTGGAGGCCGACATCAACTTCAATCTG *************************** ******************************** T._aestivum AGCGACTACGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC T._aestivum_3 AGCGACTACGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC T._turgidum_dicocco AGCGACTACGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC T._urartu AGCGACTACGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC Aegilops_tauschii AGCGATTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC T._aestivum_D AGCGATTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC Triticum_turgidum AGCGACTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC T._aestivum_B AGCGACTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC Aegilops_speltoides AGCGACTATGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAC Hordeum_vulgare AGCGACTACGAGGAGGATTTGAAGCAGATGAGGAACTGGACCAAGGAGGAGTTCGTGCAT ***** ** ************************************************** T._aestivum ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG T._aestivum_3 ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG T._turgidum_dicocco ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG T._urartu ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG Aegilops_tauschii ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG T._aestivum_D ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG Triticum_turgidum ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG T._aestivum_B ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG Aegilops_speltoides ATCCTCCGCCGCCAGAGCACGGGGTTCGCCAGGGGGAGCTCCAAGTACCGCGGCGTCACG Hordeum_vulgare ATCCTCCGCCGCCAGAGCACCGGGTTCGCCAGGGGGAGCTCGAAGTACCGCGGCGTCACG ******************** ******************** ****************** T._aestivum CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA T._aestivum_3 CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA T._turgidum_dicocco CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA T._urartu CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA Aegilops_tauschii CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA T._aestivum_D CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA Triticum_turgidum CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA T._aestivum_B CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA Aegilops_speltoides CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAGCTGCTCGGCAAGAAGTACATA Hordeum_vulgare CTCCACAAGTGCGGCCGCTGGGAGGCAAGGATGGGCCAACTGCTCGGCAAGAAGTACATA ************************************** ********************* T._aestivum TATCTGGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT T._aestivum_3 TATCTGGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT T._turgidum_dicocco TATCTGGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT T._urartu TATCTGGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT Aegilops_tauschii TATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT T._aestivum_D TATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT Triticum_turgidum TATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT T._aestivum_B TATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT Aegilops_speltoides TATCTTGGCCTCTTTGACAGCGAAGTTGAAGCTGCAAGGGCGTACGACAGGGCGGCGATT Hordeum_vulgare TATCTTGGGCTGTTCGACAGCGAAGTTGAAGCTGCAAGAGCGTACGACAGGGCGGCGATT ***** ** ** ** *********************** ********************* T._aestivum CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT T._aestivum_3 CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT T._turgidum_dicocco CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT T._urartu CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT Aegilops_tauschii CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT T._aestivum_D CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT Triticum_turgidum CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT T._aestivum_B CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT Aegilops_speltoides CGCTTCAATGGGAGGGAAGCTGTGACTAACTTTGAGAGCAGCTCCTACAATGGGGATGCT Hordeum_vulgare CGCTTCAATGGGAGGGATGCTGTGACTAACTTTGATAGTAGCTCCTACAATGGAGATGCT ***************** ***************** ** ************** ****** T._aestivum CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTGCGG T._aestivum_3 CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTGCGG T._turgidum_dicocco CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTGCGG T._urartu CCACCCGACGCTGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTGCGG Aegilops_tauschii CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGG T._aestivum_D CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGG Triticum_turgidum CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTTCGG T._aestivum_B CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTTCGG Aegilops_speltoides CCACCCGACGCCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTACGG Hordeum_vulgare ACACCTGACGTCGAAAATGAGGCAATTGTTGATGCTGATGCTCTTGACTTGGATCTAAGG **** **** ******************************************** ** T._aestivum ATGTCGCAACCCACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCAGTTA T._aestivum_3 ATGTCGCAACCCACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCAGTTA T._turgidum_dicocco ATGTCGCAACCCACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCAGTTA T._urartu ATGTCGCAACCCACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCAGTTA Aegilops_tauschii ATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTA T._aestivum_D ATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTA Triticum_turgidum ATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCGTCGCCGGCCTTCAGTTA T._aestivum_B ATGTCGCAACCTACCGCGCACGATCCCAAGCGGGACAACATCGTCGCCGGCCTTCAGTTA Aegilops_speltoides ATGTCGCAACCAACCGCGCACGATCCCAAGCGGGACAACATCATCGCCGGCCTTCAGTTA Hordeum_vulgare ATGTCGCAACCTACCGCGCACGATCCCAAGAGGGACAACATCATCGCCGGCCTTCAGTTA *********** ****************** *********** ***************** T._aestivum ACTTTTGATTCCCCTGAATCGTCAACCACAATGATCTCTTCTCAGCCAATGAGCTCATCT T._aestivum_3 ACTTTTGATTCCCCTGAATCGTCAACCACAATGATCTCTTCTCAGCCAATGAGCTCATCT T._turgidum_dicocco ACTTTTGATTCCCCTGAATCGTCAACCACAATGGTCTCTTCTCAGCCAATGAGCTCATCT T._urartu ACTTTTGATTCCCCTGAATCGTCAACCACAATGGTCTCTTCTCAGCCAATGAGCTCGTCT Aegilops_tauschii ACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCT T._aestivum_D ACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCT Triticum_turgidum ACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCT T._aestivum_B ACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCT Aegilops_speltoides ACTTTTGATTCCCCTGAATCGTCAACCACAATGCTCTCTTCTCAGCCAATGAGCTCATCT Hordeum_vulgare ACTTTTGATTCCCCTGAGTCGTCAACCACAATGGTCTCCTCTCAGCCAATGAGCTCATC- ***************** *************** **** ***************** ** T._aestivum TCGTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGT T._aestivum_3 TCGTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGT T._turgidum_dicocco TCGTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGT T._urartu TCGTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGT Aegilops_tauschii TCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGT T._aestivum_D TCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTAGCACCTCAGCAGCACCAGCGT Triticum_turgidum TCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTACCACCTCAGCAGCACCAGCGT T._aestivum_B TCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTACCACCTCAGCAGCACCAGCGT Aegilops_speltoides TCTTCCCAGTGGCCTGTGCATCAACATGGCACGGCAGTACCACCTCAGCAGCACCAGCGT Hordeum_vulgare --GTCCCAGTGGCCTGTGCATCAACATGGCACAGCAGTACCACCTCAGCAGCACCAGCGT ***************************** ****** ******************** T._aestivum TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGG----- T._aestivum_3 TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGG----- T._turgidum_dicocco TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGG----- T._urartu TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGG----- Aegilops_tauschii TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGG----- T._aestivum_D TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGTGCAGGTGCAG Triticum_turgidum TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGAG--------- T._aestivum_B TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGAG--------- Aegilops_speltoides TTGTACCCATCTGCTTGTCATGGCTTCTACCCGAACGTACAGGTGCAGGAG--------- Hordeum_vulgare TTGTACCCATCTGCTTGTCATGGCTTCTACCCCAACGTACAGGTGCAGGTGCAGG----- ******************************** **************** * T._aestivum -AGAGGCCCATGGAGGCAAGGCCCCCTGAGCAGCCGTCGTCCTTCCCCGGCTGGGGGTGG T._aestivum_3 -AGAGGCCCATGGAGGCAAGGCCCCCTGAGCAGCCGTCGTCCTTCCCCGGCTGGGGGTGG T._turgidum_dicocco -AGAGGCCCATGGAGGCAAGGCCCCCTGAGCAGCCGTCGTCCTTCCCCGGCTGGGGGTGG T._urartu -AGAGGCCCATGGAGGCAAGGCCCCCTGAGCAGCCGTCGTCCTTCCCCGGCTGGGGGTGG Aegilops_tauschii -AGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGG T._aestivum_D GAGAGGCCCATGGAGCCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGG Triticum_turgidum ---AGGCCGATGGAGGCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCGGCTGGGGGTGG T._aestivum_B ---AGGCCGATGGAGGCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCGGCTGGGGGTGG Aegilops_speltoides ---AGGCCGATGGAGGCAAGGCCCCCTGAGCCGCCGTCGTGCTTCCCCAGCTGGGGGTGG Hordeum_vulgare -AGAGGCCCTTGGAGCCAAGGCCCCCTGAGCCGTCCTC---CTTCCCCGGCTGGGGGTGG ***** ***** *************** * * ** ******* *********** T._aestivum CAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA T._aestivum_3 CAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA T._turgidum_dicocco CAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA T._urartu CAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA Aegilops_tauschii CAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA T._aestivum_D CAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA Triticum_turgidum CAAGCGCAAGCCACGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA T._aestivum_B CAAGCGCAAGCCACGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA Aegilops_speltoides CAAGCGCAAGCCATGCCGCCGGGCTCCTCCCACTCGCCGTTGCTTTACGCTGCAGCATCA Hordeum_vulgare CACGCGCAGGCCGTGCCGCCGGGCTCCTCCCACTCGTTGTTGCTTTATGCTGCAGCATCA ** ***** *** ********************** ********* ************ T._aestivum TCAGGATTTTCTACCGCCGCCGCCGGCGCGAACCTCGCCCCGCCGCCGCCG------TAC T._aestivum_3 TCAGGATTTTCTACCGCCGCCGCCGGCGCGAACCTCGCCCCGCCGCCGCCG------TAC T._turgidum_dicocco TCAGGATTCTCTACCGCCGCCGCCGGCGCGAACCTCGCCCCGCCGCCGCCG------TAC T._urartu TCAGGATTCTCTACCGCCGCCGCCGGCGCGAACCTCGCCCCGCCGCCGCCG------TAC Aegilops_tauschii TCAGGATTCTCTACCGCCGCCG---GCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTAC T._aestivum_D TCAGGATTCTCTACCGCCGCCG---GCGCGCACCCCGCCCCGCCGCCGCCGCCGTCGTAC Triticum_turgidum TCAGGATTCTCTACCGCCGCCG---GCGCGCACCCCGCCCCGCCGCCGCCG---TCGTAC T._aestivum_B TCAGGATTCTCTACCGCCGCCG---GCGCGCACCCCGCCCCGCCGCCGCCG---TCGTAC Aegilops_speltoides TCAGGATTCTCTACCGCCGCCG---GCGCGCACCCCGCCCCGCCGCCGCCG---TCGTAC Hordeum_vulgare TCAGGATTCTCTACCGCCGCCG---GCGCGAACCCCGCCCCGCCGCCGTCG------TAC ******** ************* ***** *** ************* ** *** T._aestivum CCGGACCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTGAT T._aestivum_3 CCGGACCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTGA- T._turgidum_dicocco CCGGACCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTGA- T._urartu CCGGACCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTGA- Aegilops_tauschii CCGGATCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAG- T._aestivum_D CCGGATCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAG- Triticum_turgidum CCGGATCA---CCACCGGTT-TACTTCCCCCGCCCGCCGGACAACTAG- T._aestivum_B CCGGATCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAG- Aegilops_speltoides CCGGACCA---CCACCGGTTCTACTTCCCCCGCCCGCCGGACAACTAG- Hordeum_vulgare CCCGACCATCACCACCGCTTCTACTTCCCCCGCCCGCCGGACAACT--- ** ** ** ****** ** *************************